Motif HL_41700.1 Version HL_41700.1 of this group appears in releases 1.15 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3U5H_029 | 3U5H | 0.0000 | 2 | 5 | 25S rRNA | U | 1347 | U | 1348 | G | 1349 | A | 1350 | U | 1351 | A | 1352 | U | 1353 | A | 1355 | G | 1357 | cWW |
| 2 | HL_4CUV_029 | 4CUV | 0.8374 | 2 | 1 | 25S RRNA | U | 1347 | U | 1348 | G | 1349 | A | 1350 | U | 1351 | A | 1352 | U | 1353 | A | 1355 | G | 1357 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUGAUAUGAUG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGAUAUGAU | 2 |
Release history
| Release | 1.15 | 1.16 | 1.17 | 1.18 |
|---|---|---|---|---|
| Date | 2014-06-15 | 2014-07-26 | 2014-09-06 | 2014-10-09 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_41700.1 | Only in the parent motif |
|---|---|---|---|
| HL_78420.1 Compare | HL_3U5H_029 | HL_4CUV_029 |
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R-R-R-R
- Heat map statistics
- Min 0.84 | Avg 0.42 | Max 0.84
Coloring options: