HL_3U5H_029

3D structure

PDB id

3U5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 60S subunit, ribosome B

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUGAUAUGAUG

Length

11 nucleotides

Bulged bases

3U5H|1|5|G|1354, 3U5H|1|5|U|1356

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41700.1

Basepair signature

cWW-R-R-R-R-R-R

Number of instances in this motif group

2

Unit IDs

3U5H|1|5|U|1347
3U5H|1|5|U|1348
3U5H|1|5|G|1349
3U5H|1|5|A|1350
3U5H|1|5|U|1351
3U5H|1|5|A|1352
3U5H|1|5|U|1353
3U5H|1|5|G|1354
3U5H|1|5|A|1355
3U5H|1|5|U|1356
3U5H|1|5|G|1357

Current chains

Chain 5

25S rRNA

Nearby chains