Motif HL_41725.1 Version HL_41725.1 of this group appears in releases 3.89 to 3.90

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4		5		6		7	1-7	2-6
1	HL_6N5P_001	6N5P	0.0000	2	A	cyclic di-AMP riboswitch	A	14	U	15	G	16	U	17	G	19	U	21	U	22	cWW	cwW
2	HL_8C3A_034	8C3A	0.6006	1	1	LSU rRNA	G	1562	A	1563	U	1564	U	1565	U	1567	U	1568	C	1569	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
AUGUCGUUU	1
GAUUUUUC	1

Non-Watson-Crick part of the motif

Sequence	Counts
UGUCGUU	1
AUUUUU	1

Release history

Release	3.89	3.90
Date	2024-10-09	2024-11-06
Status	New id, 2 parents	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (2)
Basepair signature: cWW-F-F-F-F-F
Heat map statistics: Min 0.60 | Avg 0.30 | Max 0.60

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