Motif HL_42077.3 Version HL_42077.3 of this group appears in releases 1.14 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1S72_019 | 1S72 | 0.0000 | 2 | 0 | G | 670 | A | 671 | U | 673 | U | 675 | C | 676 | cWW | tSH |
| 2 | HL_2QBG_020 | 2QBG | 0.6442 | 2 | B | C | 611 | G | 612 | A | 614 | A | 616 | G | 617 | cWW | tSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAGUAUC | 1 |
| CGAAUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGUAU | 1 |
| GAAUA | 1 |
Release history
| Release | 1.14 | 1.15 | 1.16 | 1.17 | 1.18 |
|---|---|---|---|---|---|
| Date | 2014-04-27 | 2014-06-15 | 2014-07-26 | 2014-09-06 | 2014-10-09 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_42077.3 | Only in the parent motif |
|---|---|---|---|
| HL_42077.2 Compare | HL_1S72_019, HL_2QBG_020 | HL_1P6V_001 |
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tSH-R
- Heat map statistics
- Min 0.64 | Avg 0.32 | Max 0.64
Coloring options: