Motif HL_42094.1 Version HL_42094.1 of this group appears in releases 1.8 to 1.15
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2AZX_001 | 2AZX | 0.0000 | 4 | C | C | 513 | A | 514 | A | 515 | A | 521 | G | 522 | cWW | cWS |
| 2 | HL_4MGN_006 | 4MGN | 0.3901 | 4 | D | C | 13 | A | 14 | G | 15 | A | 20 | G | 21 | cWW | ncWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAUGGUAG | 1 |
| CAGUGGUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAUGGUA | 1 |
| AGUGGUA | 1 |
Release history
| Release | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 | 1.15 |
|---|---|---|---|---|---|---|---|---|
| Date | 2013-11-04 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 | 2014-04-27 | 2014-06-15 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_42094.1 | Only in the parent motif |
|---|---|---|---|
| HL_07315.1 Compare | HL_2AZX_001 | HL_4MGN_006 |
Children motifs
| Child motif | Common motif instances | Only in HL_42094.1 | Only in the child motif |
|---|---|---|---|
| HL_42094.2 Compare | HL_2AZX_001, HL_4MGN_006 | HL_3WQY_001 |
- Annotations
-
- (2)
- Basepair signature
- cWW-cWS-R
- Heat map statistics
- Min 0.39 | Avg 0.20 | Max 0.39
Coloring options: