Motif HL_42733.3 Version HL_42733.3 of this group appears in releases 3.48 to 3.53
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5J7L_012 | 5J7L | 0.4607 | 1 | AA | SSU rRNA | G | 462 | U | 463 | U | 464 | A | 465 | A | 466 | A | 468 | C | 469 | C | 470 | cWW | |||
| 2 | HL_4V9F_043 | 4V9F | 0.0000 | 1 | 0 | LSU rRNA | C | 1705 | G | 1706 | G | 1707 | C | 1708 | G | 1709 | A | 1711 | A | 1712 | G | 1713 | cWW | tSH | ntSH | |
| 3 | HL_1QTQ_002 | 1QTQ | 0.9620 | 1 | B | tRNA | A | 931 | U | 932 | U | 933 | C | 934 | U | 935 | A | 937 | U | 938 | U | 939 | cWW | tSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUAAUACC | 1 |
| CGGCGAAAG | 1 |
| AUUCUGAUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUAAUAC | 1 |
| GGCGAAA | 1 |
| UUCUGAU | 1 |
- Annotations
- Basepair signature
- cWW-R-tSH-R-R
- Heat map statistics
- Min 0.46 | Avg 0.54 | Max 1.00
Coloring options: