Motif HL_43598.1 Version HL_43598.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 7-8 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1H4S_001 | 1H4S | 0 | 1 | tRNA D-loop | T | tRNA | C | 13 | A | 14 | G | 15 | C | 16 | C | 17 | C | 17|||A | G | 19 | U | 20 | A | 21 | G | 22 | cWW | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAGCCCGGUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGCCCGGUA | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_43598.1 | Only in the child motif |
|---|---|---|---|
| HL_98833.1 Compare | HL_1H4S_001 | HL_2ZUF_001, HL_1J1U_001 |
- Annotations
-
- tRNA D-loop (1)
- Basepair signature
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: