Motif HL_43883.1 Version HL_43883.1 of this group appears in releases 2.0 to 2.0
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | HL_5AJ0_117 | 5AJ0 | 0.0000 | 3 | Bv | tRNA | C | 13 | A | 14 | G | 15 | U | 16 | U | 20 | A | 21 | G | 22 | cWW |
2 | HL_3J7R_113 | 3J7R | 1.0131 | 2 | S6 | tRNA | C | 14 | G | 15 | A | 16 | A | 17 | U | 20 | A | 21 | G | 22 | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CAGUCGGUAG | 1 |
CGAAGGUAG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AGUCGGUA | 1 |
GAAGGUA | 1 |
Release history
Release | 2.0 |
---|---|
Date | 2017-04-24 |
Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R-R
- Heat map statistics
- Min 1.01 | Avg 0.51 | Max 1.01
Coloring options: