HL_5AJ0_117
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CAGUCGGUAG
- Length
- 10 nucleotides
- Bulged bases
- 5AJ0|1|Bv|C|17, 5AJ0|1|Bv|G|18, 5AJ0|1|Bv|G|19
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_43883.1
- Basepair signature
- cWW-R-R-R-R
- Number of instances in this motif group
- 2
Unit IDs
5AJ0|1|Bv|C|13
5AJ0|1|Bv|A|14
5AJ0|1|Bv|G|15
5AJ0|1|Bv|U|16
5AJ0|1|Bv|C|17
5AJ0|1|Bv|G|18
5AJ0|1|Bv|G|19
5AJ0|1|Bv|U|20
5AJ0|1|Bv|A|21
5AJ0|1|Bv|G|22
Current chains
- Chain Bv
- tRNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain AJ
- 60S ribosomal protein L11
- Chain Ao
- 60S ribosomal protein L36a
Coloring options: