Motif HL_44444.1 Version HL_44444.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1GAX_002 | 1GAX | 0.7303 | 6 | C | TRNA(VAL) | C | 930 | A | 936 | G | 938 | cWW | |
| 2 | HL_1ZBH_001 | 1ZBH | 0.0000 | 3 | Mini UNCG | F | RNA (20-mer) | U | 11 | U | 14 | A | 16 | cWW |
| 3 | HL_1FJG_018 | 1FJG | 0.4230 | 2 | Mini UNCG (H) | A | SSU rRNA | G | 838 | C | 840 | C | 848 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCUCACACG | 1 |
| UUUUCA | 1 |
| GUCUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUCACAC | 1 |
| UUUC | 1 |
| UCU | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_44444.1 | Only in the child motif |
|---|---|---|---|
| HL_95423.1 Compare | HL_1FJG_018, HL_1ZBH_001 | HL_1GAX_002 | HL_3U5H_069, HL_3U5H_004 |
- Annotations
-
- Mini UNCG (H) (1)
- (1)
- Mini UNCG (1)
- Basepair signature
- Heat map statistics
- Min 0.42 | Avg 0.50 | Max 1.08
Coloring options: