Motif HL_45036.1 Version HL_45036.1 of this group appears in releases 3.88 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6IV9_001 | 6IV9 | 0.0688 | 3 | B | A | -21 | A | -20 | U | -16 | cWW | |
| 2 | HL_2Y9H_003 | 2Y9H | 0.0000 | 3 | F | C | 11 | G | 12 | G | 16 | cWW | |
| 3 | HL_1P6V_001 | 1P6V | 0.1627 | 3 | UNCG variation | B | C | 26 | U | 27 | G | 31 | cWW |
| 4 | HL_3AM1_002 | 3AM1 | 0.1754 | 3 | GNRA variation | B | C | 32 | U | 33 | G | 37 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUCGG | 2 |
| AAAUUU | 1 |
| CGCGUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUCG | 2 |
| AAUU | 1 |
| GCGU | 1 |
Release history
| Release | 3.88 |
|---|---|
| Date | 2024-09-11 |
| Status | New id, > 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- UNCG variation (1)
- GNRA variation (1)
- Basepair signature
- cWW-F
- Heat map statistics
- Min 0.07 | Avg 0.27 | Max 0.79
Coloring options: