Motif HL_46023.1 Version HL_46023.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2VPL_001 | 2VPL | 0.0000 | 3 | B | FRAGMENT OF MRNA FOR L1-OPERON CONTAINING REGULATOR L1-BINDING SITE | C | 19 | G | 20 | A | 21 | C | 25 | G | 26 | ncWW | ncWW | |
| 2 | HL_3J7Y_024 | 3J7Y | 0.9883 | 1 | A | LSU rRNA | C | 2555 | A | 2556 | C | 2557 | U | 2559 | G | 2560 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAACUCG | 1 |
| CACAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAACUC | 1 |
| ACAU | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-cWW
- Heat map statistics
- Min 0.99 | Avg 0.49 | Max 0.99
Coloring options: