Motif HL_46501.1 Version HL_46501.1 of this group appears in releases 3.96 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4M4O_001 | 4M4O | 0.0000 | 1 | D-loop related | B | RNA (59-MER) | C | 32 | U | 33 | A | 35 | G | 36 | cWW | cWS |
| 2 | HL_3DD2_001 | 3DD2 | 0.9346 | 2 | B | RNA (26-MER) | CFL | 11 | UFT | 12 | A | 15 | G | 16 | cWW | cWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUAG | 1 |
| (CFL)(UFT)GAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUA | 1 |
| (UFT)GAA | 1 |
- Annotations
-
- (1)
- D-loop related (1)
- Basepair signature
- cWW-cWS
- Heat map statistics
- Min 0.93 | Avg 0.47 | Max 0.93
Coloring options: