#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 61-6
1 HL_3WQY_0013WQY1.18013C tRNAC1613A1614G1615C1616A1621G1622cWW
2 HL_4RDX_0014RDX0.00005C tRNAC13A14G15C16A21G22cWW
3 HL_4RDX_0044RDX0.00005C tRNAC13||||4_577A14||||4_577G15||||4_577C16||||4_577A21||||4_577G22||||4_577cWW

3D structures

Complete motif including flanking bases
SequenceCounts
CAGCUGGUUAG2
CAGCGGGAG1
Non-Watson-Crick part of the motif
SequenceCounts
AGCUGGUUA2
AGCGGGA1

Release history

Release3.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.61
Date2019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-17
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-R-R-R
    Heat map statistics
    Min 1.18 | Avg 0.52 | Max 1.18
    Help

    Coloring options:

    HL_3WQY_001:HL_3WQY_001 = 0HL_3WQY_001:HL_4RDX_001 = 1.1801HL_3WQY_001:HL_4RDX_004 = 1.1801HL_4RDX_001:HL_3WQY_001 = 1.1801HL_4RDX_001:HL_4RDX_001 = 0HL_4RDX_001:HL_4RDX_004 = 0HL_4RDX_004:HL_3WQY_001 = 1.1801HL_4RDX_004:HL_4RDX_001 = 0HL_4RDX_004:HL_4RDX_004 = 0HL_3WQY_001HL_4RDX_001HL_4RDX_004Discrepancy0.000.200.400.600.801.00
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