Motif HL_50765.1 Version HL_50765.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | 4-7 | 7-8 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8B0X_037 | 8B0X | 0.8430 | 1 | a | LSU rRNA | U | 158 | G | 159 | A | 160 | A | 161 | U | 162 | C | 163 | A | 165 | U | 166 | A | 167 | G | 168 | cWW | tSH | tHW | tHW | |
| 2 | HL_7A0S_075 | 7A0S | 0.0000 | 4 | X | LSU rRNA | A | 253 | A | 254 | A | 255 | C | 256 | G | 257 | C | 258 | G | 263 | U | 264 | U | 265 | U | 266 | ncWW | ncWW | ncSH | ||
| 3 | HL_4WF9_068 | 4WF9 | 0.8100 | 2 | X | LSU rRNA | C | 280 | A | 281 | A | 282 | G | 283 | C | 284 | U | 286 | C | 288 | U | 289 | U | 290 | G | 291 | cWW | ncWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGAAUCCAUAG | 1 |
| AAACGCUUGCGUUU | 1 |
| CAAGCUUGCUUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAUCCAUA | 1 |
| AACGCUUGCGUU | 1 |
| AAGCUUGCUU | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.81 | Avg 0.59 | Max 0.98
Coloring options: