Motif HL_51713.1 Version HL_51713.1 of this group appears in releases 3.88 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-3 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4WF9_071 | 4WF9 | 0.4696 | 1 | GNRA | X | U | 1762 | U | 1763 | A | 1765 | C | 1766 | G | 1767 | ncWW | ntsS |
| 2 | HL_3FOZ_005 | 3FOZ | 0.0000 | 4 | D | A | 31 | U | 32 | A | 36 | A | 38 | U | 39 | cWW | ntsS | |
| 3 | HL_3EPH_002 | 3EPH | 0.2057 | 4 | E | A | 31 | U | 32 | A | 36 | A | 38 | U | 39 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUAACG | 1 |
| AUUGAAAAU | 1 |
| AUUGCAAAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAAC | 1 |
| UUGAAAA | 1 |
| UUGCAAA | 1 |
Release history
| Release | 3.88 |
|---|---|
| Date | 2024-09-11 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- GNRA (1)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.21 | Avg 0.28 | Max 0.56
Coloring options: