Motif HL_52116.1 Version HL_52116.1 of this group appears in releases 1.8 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1QU2_001 | 1QU2 | 0 | 4 | T | tRNA | C | 13 | A | 14 | G | 15 | G | 16 | U | 17 | A | 21|||A | G | 22 | cWW | cWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAGGUGGUUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGGUGGUUA | 1 |
Release history
| Release | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 | 1.15 | 1.16 | 1.17 | 1.18 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2013-11-04 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 | 2014-04-27 | 2014-06-15 | 2014-07-26 | 2014-09-06 | 2014-10-09 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_52116.1 | Only in the parent motif |
|---|---|---|---|
| HL_12595.2 Compare | HL_1QU2_001 | HL_2ZUF_001, HL_3L0U_001 |
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-cWS-R-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: