Motif HL_52248.1 Version HL_52248.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V9F_019 | 4V9F | 0.0000 | 2 | 0 | LSU rRNA | G | 670 | A | 671 | U | 673 | U | 675 | C | 676 | cWW | tSH |
| 2 | HL_1Y0Q_006 | 1Y0Q | 0.4446 | 2 | A | Group I catalytic intron | C | 171 | U | 172 | C | 174 | A | 176 | G | 177 | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAGUAUC | 1 |
| CUUCUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGUAU | 1 |
| UUCUA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tSH-R
- Heat map statistics
- Min 0.44 | Avg 0.22 | Max 0.44
Coloring options: