Motif HL_52841.1 Version HL_52841.1 of this group appears in releases 3.77 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3AMU_002 | 3AMU | 0.2562 | 8 | B | tRNA | G | 30 | G | 31 | C | 40 | cWW |
| 2 | HL_4V9F_003 | 4V9F | 0.2502 | 2 | 0 | LSU rRNA | G | 118 | A | 119 | C | 122 | cWW |
| 3 | HL_2Y9H_004 | 2Y9H | 0.2309 | 3 | H | RNA (19-mer) | C | 11 | G | 12 | G | 16 | cWW |
| 4 | HL_1HMH_006 | 1HMH | 0.2286 | 2 | E | HAMMERHEAD RIBOZYME-RNA STRAND | G | 101 | G | 102 | C | 111 | cWW |
| 5 | HL_1HMH_004 | 1HMH | 0.1696 | 2 | A | HAMMERHEAD RIBOZYME-RNA STRAND | G | 101 | G | 102 | C | 111 | cWW |
| 6 | HL_3SKI_003 | 3SKI | 0.0000 | 3 | A | RNA (68-MER) | A | 67 | C | 68 | U | 72 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGCCC | 2 |
| GGCUCAUAACC | 1 |
| GAAUC | 1 |
| CGCGUG | 1 |
| ACCUAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GCC | 2 |
| GCUCAUAAC | 1 |
| AAU | 1 |
| GCGU | 1 |
| CCUA | 1 |
Release history
| Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
| Status | New id, > 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
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