Motif HL_54566.1 Version HL_54566.1 of this group appears in releases 0.1 to 0.1
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1J1U_001 | 1J1U | 0 | 3 | tRNA D-loop | B | C | 513 | A | 514 | G | 515 | C | 516 | C | 517 | U | 518 | A | 522 | G | 523 | cWW | ncWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAGCCUGGUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGCCUGGUA | 1 |
Release history
| Release | 0.1 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_54566.1 | Only in the child motif |
|---|---|---|---|
| HL_52890.2 Compare | HL_1J1U_001 | HL_3EPH_001, HL_2ZM5_001 |
- Annotations
-
- tRNA D-loop (1)
- Basepair signature
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: