Motif HL_56372.1 Version HL_56372.1 of this group appears in releases 3.2 to 3.21
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4GXY_003 | 4GXY | 0 | 1 | Pseudoknot geometry | A | Cobalamin riboswitch | G | 65 | C | 67 | C | 68 | C | 69 | G | 70 | C | 71 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUCCCGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCCCG | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 | 3.18 | 3.19 | 3.20 | 3.21 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 | 2018-11-16 | 2018-12-14 | 2019-01-11 | 2019-02-08 | 2019-03-08 | 2019-04-05 | 2019-05-03 | 2019-05-31 | 2019-06-28 | 2019-07-26 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Pseudoknot geometry (1)
- Basepair signature
- cWW-R-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: