Motif HL_56859.1 Version HL_56859.1 of this group appears in releases 0.3 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-4 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3G78_009 | 3G78 | 0.0000 | 0 | A | Group II catalytic intron D1-D4-3 | C | 368 | G | 369 | A | 370 | A | 371 | C | 372 | G | 373 | cWW | tSW | |
| 2 | HL_3V2F_063 | 3V2F | 0.6468 | 0 | A | 23S Ribosomal RNA | C | 2701 | U | 2702 | C | 2703 | C | 2704 | A | 2705 | G | 2706 | cWW | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAACG | 1 |
| CUCCAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAC | 1 |
| UCCA | 1 |
Release history
Parent motifs
| Parent motif | Common motif instances | Only in HL_56859.1 | Only in the parent motif |
|---|---|---|---|
| HL_69367.1 Compare | HL_3G78_009 | HL_3V2F_063 | HL_3IVK_008, HL_3IVK_003 |
Children motifs
| Child motif | Common motif instances | Only in HL_56859.1 | Only in the child motif |
|---|---|---|---|
| HL_68697.1 Compare | HL_3V2F_063 | HL_3G78_009 | HL_4FAW_009 |
- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R
- Heat map statistics
- Min 0.65 | Avg 0.32 | Max 0.65
Coloring options: