Motif HL_69367.1 Version HL_69367.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3IVK_003 | 3IVK | 0.5942 | 2 | Fab BL3-6 binding hairpin with tSW | M | class I ligase product | G | 59 | A | 61 | C | 63 | A | 64 | C | 65 | cWW | tSW |
| 2 | HL_3IVK_008 | 3IVK | 0.0000 | 2 | C | class I ligase product | G | 59 | A | 61 | C | 63 | A | 64 | C | 65 | cWW | tSW | |
| 3 | HL_3G78_009 | 3G78 | 0.0056 | 1 | A | Group II catalytic intron D1-D4-3 | C | 368 | G | 369 | A | 371 | C | 372 | G | 373 | cWW | tSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAACAC | 2 |
| CGAACG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAACA | 2 |
| GAAC | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_69367.1 | Only in the child motif |
|---|---|---|---|
| HL_57843.1 Compare | HL_3IVK_008 | HL_3IVK_003, HL_3G78_009 | |
| HL_56859.1 Compare | HL_3G78_009 | HL_3IVK_008, HL_3IVK_003 | HL_3V2F_063 |
- Annotations
-
- (2)
- Fab BL3-6 binding hairpin with tSW (1)
- Basepair signature
- Heat map statistics
- Min 0.01 | Avg 0.27 | Max 0.60
Coloring options: