Motif HL_57087.2 Version HL_57087.2 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 1-4 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4CUV_045 | 4CUV | 0.1892 | 1 | 1 | G | 2110 | U | 2112 | A | 2113 | C | 2114 | cWW |
| 2 | HL_3U5H_045 | 3U5H | 0.0000 | 1 | 5 | G | 2110 | U | 2112 | A | 2113 | C | 2114 | cWW |
| 3 | HL_1VX6_045 | 1VX6 | 0.2178 | 1 | A | G | 2403 | A | 2405 | A | 2406 | C | 2407 | cWW |
| 4 | HL_4W21_045 | 4W21 | 0.2829 | 1 | 5 | G | 3614 | U | 3616 | G | 3617 | C | 3618 | cWW |
| 5 | HL_4ILL_001 | 4ILL | 0.8569 | 3 | R | U | 8 | C | 10 | A | 12 | A | 14 | cWW |
| 6 | HL_4ILL_002 | 4ILL | 0.9223 | 3 | C | U | 8 | C | 10 | A | 12 | A | 14 | cWW |
| 7 | HL_2PJP_001 | 2PJP | 0.8792 | 0 | B | G | 22 | G | 23 | U | 24 | C | 25 | cWW |
| 8 | HL_2PLY_002 | 2PLY | 0.8945 | 0 | E | G | 22 | G | 23 | U | 24 | C | 25 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGUAC | 2 |
| UACUAUA | 2 |
| GGUC | 2 |
| GAAAC | 1 |
| GGUGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUA | 2 |
| ACUAU | 2 |
| GU | 2 |
| AAA | 1 |
| GUG | 1 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-09 |
| Status | Updated, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in HL_57087.2 | Only in the parent motif |
|---|---|---|---|
| HL_57087.1 Compare | HL_2PLY_002, HL_4CUV_045, HL_4ILL_001, HL_4ILL_002, HL_2PJP_001, HL_3U5H_045, HL_1VX6_045 | HL_4W21_045 | HL_1VWW_045 |
Children motifs
This motif has no children motifs.
Coloring options: