Motif HL_57293.1 Version HL_57293.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | HL_5ID6_001 | 5ID6 | 0.0875 | 4 | G | RNA (21-mer) | C | 11 | U | 12 | G | 17 | cWW |
2 | HL_4LFB_032 | 4LFB | 0.0000 | 3 | A | SSU rRNA | C | 1515 | G | 1516 | G | 1520 | cWW |
3 | HL_5J7L_031 | 5J7L | 0.0883 | 3 | AA | SSU rRNA | G | 1515 | 2MG | 1516 | C | 1520 | cWW |
4 | HL_6CZR_103 | 6CZR | 0.1535 | 3 | 1a | SSU rRNA | C | 1493 | G | 1494 | G | 1498 | cWW |
5 | HL_8H9D_001 | 8H9D | 0.1119 | 4 | G | RNA (21-mer) | C | 11 | U | 12 | G | 17 | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CUAAGUG | 2 |
CGGG | 2 |
GGC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
UAAGU | 2 |
GG(MA6)(MA6) | 2 |
(2MG)G(MA6)(MA6) | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.Coloring options: