Motif HL_59735.4 Version HL_59735.4 of this group appears in releases 3.95 to 3.95
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V87_108 | 4V87 | 0.3872 | 0 | BB | tRNA | C | 49 | A | 50 | A | 51 | U | 52 | A | 53 | G | 54 | G | 55 | ||
| 2 | HL_4WSM_210 | 4WSM | 0.0000 | 0 | 1K | tRNA | C | 49 | A | 50 | A | 51 | U | 52 | A | 53 | G | 54 | G | 55 | ncWW | ntSH |
| 3 | HL_8CRE_022 | 8CRE | 0.7748 | 0 | 1 | LSU rRNA | U | 1019 | G | 1020 | A | 1021 | A | 1022 | A | 1023 | U | 1024 | G | 1025 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAUAGG | 2 |
| UGAAAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAUAG | 2 |
| GAAAU | 1 |
Release history
| Release | 3.95 |
|---|---|
| Date | 2025-03-26 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-F-F-F-F-F
- Heat map statistics
- Min 0.39 | Avg 0.44 | Max 0.81
Coloring options: