Motif HL_60266.1 Version HL_60266.1 of this group appears in releases 3.96 to 3.96
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | 4-7 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6DME_003 | 6DME | 0.0000 | 1 | A | ppGpp Riboswitch | G | 78 | G | 79 | A | 80 | U | 81 | A | 82 | A | 83 | A | 84 | A | 85 | A | 87 | C | 88 | cWW | cWW | tWH | tWH |
| 2 | HL_7A0S_045 | 7A0S | 0.8461 | 3 | X | LSU rRNA | G | 1767 | U | 1768 | U | 1769 | U | 1770 | C | 1773 | A | 1774 | A | 1775 | A | 1776 | U | 1778 | C | 1779 | cWW | ncwW | tWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAUAAAAGAC | 1 |
| GUUUACCAAAAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAUAAAAGA | 1 |
| UUUACCAAAAU | 1 |
Release history
| Release | 3.96 |
|---|---|
| Date | 2025-04-23 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-tWH-F-F-F-F
- Heat map statistics
- Min 0.85 | Avg 0.42 | Max 0.85
Coloring options: