#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 51-52-4
1 HL_3D2V_0013D2V0.00001 ATPP riboswitch (THI element)G17U19C20A21C22cWWcWH
2 HL_4Y4O_1064Y4O0.86011 2A LSU rRNAG139G140A141A142C142|||AcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GUUCAC1
GGGAAC1
Non-Watson-Crick part of the motif
SequenceCounts
UUCA1
GGAA1

Release history

Release3.33.43.53.63.73.83.93.103.23.113.123.133.143.153.163.173.183.193.203.213.223.233.243.25
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-09-262018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-13
StatusExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
Basepair signature
cWW-cWH-R
Heat map statistics
Min 0.86 | Avg 0.43 | Max 0.86
Help

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.074 s