Motif HL_61547.4 Version HL_61547.4 of this group appears in releases 1.5 to 1.8
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4IOA_021 | 4IOA | 0.9442 | 3 | X | LSU rRNA | C | 725 | G | 726 | U | 727 | A | 731 | G | 732 | cWW | |
| 2 | HL_2QBG_032 | 2QBG | 0.0000 | 1 | B | 23S rRNA | C | 1172 | U | 1173 | U | 1174 | U | 1176 | G | 1177 | cWW | |
| 3 | HL_1OOA_002 | 1OOA | 0.6792 | 1 | D | RNA aptamer | U | 13 | G | 14 | U | 15 | A | 17 | G | 18 | cWW | ncSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGUGACAG | 1 |
| CUUAUG | 1 |
| UGUAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUGACA | 1 |
| UUAU | 1 |
| GUAA | 1 |
Release history
| Release | 1.5 | 1.6 | 1.7 | 1.8 |
|---|---|---|---|---|
| Date | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-04 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_61547.4 | Only in the parent motif |
|---|---|---|---|
| HL_61547.3 Compare | HL_1OOA_002, HL_2QBG_032, HL_4IOA_021 | HL_4FY3_011 |
Children motifs
| Child motif | Common motif instances | Only in HL_61547.4 | Only in the child motif |
|---|---|---|---|
| HL_61547.5 Compare | HL_1OOA_002, HL_2QBG_032, HL_4IOA_021 | HL_4FY3_011 |
Coloring options: