Motif HL_62809.1 Version HL_62809.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | 29 | 30 | 1-30 | 2-29 | 3-28 | 4-27 | 5-26 | ||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5IT9_037 | 5IT9 | 0 | 2 | i | G | 6048 | U | 6049 | A | 6050 | A | 6051 | A | 6052 | U | 6053 | A | 6054 | C | 6055 | A | 6056 | A | 6057 | U | 6058 | U | 6059 | U | 6060 | G | 6062 | A | 6063 | G | 6064 | A | 6065 | G | 6066 | G | 6067 | U | 6069 | A | 6070 | A | 6071 | U | 6072 | A | 6073 | A | 6074 | A | 6075 | U | 6076 | U | 6077 | A | 6078 | C | 6079 | cWW | ncWW | ncWW | ncWW | ncWw |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUAAAUACAAUUUUGAGAGGUUAAUAAAUUAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAAAUACAAUUUUGAGAGGUUAAUAAAUUA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: