Motif HL_62912.1 Version HL_62912.1 of this group appears in releases 3.88 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1A9N_001 | 1A9N | 0.0000 | 9 | Q | RNA (24-mer) | G | 4 | U | 5 | A | 6 | U | 7 | U | 17 | C | 18 | cWW | cwW |
| 2 | HL_4WT8_234 | 4WT8 | 0.4507 | 6 | C3 | tRNA | U | 12 | C | 13 | A | 14 | G | 15 | G | 22 | A | 23 | ncWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUAUUGCAGUACCUC | 1 |
| UCAGUCGGUAGA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAUUGCAGUACCU | 1 |
| CAGUCGGUAG | 1 |
Release history
| Release | 3.88 |
|---|---|
| Date | 2024-09-11 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-F-F
- Heat map statistics
- Min 0.45 | Avg 0.23 | Max 0.45
Coloring options: