Motif HL_63154.1 Version HL_63154.1 of this group appears in releases 3.87 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4KR9_004 | 4KR9 | 0.6682 | 2 | X | RNA (39-MER) | G | 19 | G | 20 | A | 23 | C | 24 | cWW | |
| 2 | HL_5J7L_025 | 5J7L | 0.0000 | 3 | AA | SSU rRNA | G | 1134 | U | 1135 | G | 1138 | C | 1140 | ncWW | ntSW |
| 3 | HL_4LFB_026 | 4LFB | 0.2044 | 3 | A | SSU rRNA | G | 1134 | U | 1135 | G | 1138 | C | 1140 | cWW | tSW |
| 4 | HL_4V9F_005 | 4V9F | 0.3813 | 3 | 0 | LSU rRNA | C | 136 | U | 137 | G | 140 | G | 142 | cWW | tSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAAAC | 1 |
| GUCCGGC | 1 |
| GUUCGGC | 1 |
| CUUCGCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAA | 1 |
| UCCGG | 1 |
| UUCGG | 1 |
| UUCGC | 1 |
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