Motif HL_63699.1 Version HL_63699.1 of this group appears in releases 3.2 to 3.24
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-4 | 5-6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4IOA_023 | 4IOA | 0.5585 | 1 | X | LSU rRNA | U | 792 | G | 793 | A | 795 | A | 796 | A | 797 | G | 798 | cWW | ncSW | ||
| 2 | HL_4V9F_025 | 4V9F | 0.0918 | 1 | 0 | LSU rRNA | U | 872 | G | 873 | A | 875 | A | 876 | G | 877 | G | 878 | cWW | tSW | ||
| 3 | HL_5J7L_156 | 5J7L | 0.0000 | 1 | DA | LSU rRNA | U | 779 | G | 780 | A | 782 | A | 783 | G | 784 | G | 785 | cWW | tSW | ||
| 4 | HL_4Y4O_126 | 4Y4O | 0.1470 | 1 | 2A | LSU rRNA | U | 779 | G | 780 | A | 782 | A | 783 | A | 784 | G | 785 | cWW | tSW | ||
| 5 | HL_4WF9_024 | 4WF9 | 0.3453 | 1 | X | LSU rRNA | A | 824 | G | 825 | A | 827 | A | 828 | U | 829 | U | 830 | cWW | tSW | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGAAAAG | 2 |
| UGAAAGG | 2 |
| AGAAAUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAAA | 2 |
| GAAAG | 2 |
| GAAAU | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 | 2018-11-16 | 2018-12-14 | 2019-01-11 | 2019-02-08 | 2019-03-08 | 2019-04-05 | 2019-05-03 | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: