Motif HL_64371.2 Version HL_64371.2 of this group appears in releases 1.0 to 1.13
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 1-12 | 2-11 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3DHS_005 | 3DHS | 0.0000 | 0 | A | RNase P RNA | C | 313 | G | 314 | G | 315 | C | 316 | G | 317 | C | 318 | A | 319 | U | 320 | G | 321 | C | 322 | A | 323 | G | 324 | cWW | ntSH |
| 2 | HL_3IVK_006 | 3IVK | 0.6527 | 0 | C | class I ligase product | G | 1 | G | 2 | A | 3 | A | 4||A | C | 5||A | A | 6 | C | 7 | U | 8 | A | 9 | U | 10 | A | 11 | C | 12 | cWW | tSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGGCGCAUGCAG | 1 |
| GGAACACUAUAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGCGCAUGCA | 1 |
| GAACACUAUA | 1 |
Release history
| Release | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2013-03-04 | 2013-04-06 | 2013-05-04 | 2013-06-01 | 2013-07-03 | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-04 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_64371.2 | Only in the parent motif |
|---|---|---|---|
| HL_64371.1 Compare | HL_3DHS_005, HL_3IVK_006 | HL_2A64_006 |
Children motifs
| Child motif | Common motif instances | Only in HL_64371.2 | Only in the child motif |
|---|---|---|---|
| HL_64371.3 Compare | HL_3DHS_005, HL_3IVK_006 | HL_2A64_006 |
- Annotations
-
- (2)
- Basepair signature
- cWW-tSH-R-R-R-R-R-R-R-R
- Heat map statistics
- Min 0.65 | Avg 0.33 | Max 0.65
Coloring options: