Motif HL_64371.5 Version HL_64371.5 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 1-12 | 2-11 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3DHS_005 | 3DHS | 0.0000 | 0 | A | C | 313 | G | 314 | G | 315 | C | 316 | G | 317 | C | 318 | A | 319 | U | 320 | G | 321 | C | 322 | A | 323 | G | 324 | cWW | ntSH |
| 2 | HL_3IVK_006 | 3IVK | 0.6527 | 0 | C | G | 1 | G | 2 | A | 3 | A | 4||A | C | 5||A | A | 6 | C | 7 | U | 8 | A | 9 | U | 10 | A | 11 | C | 12 | cWW | tSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGGCGCAUGCAG | 1 |
| GGAACACUAUAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGCGCAUGCA | 1 |
| GAACACUAUA | 1 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-09 |
| Status | Updated, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in HL_64371.5 | Only in the parent motif |
|---|---|---|---|
| HL_64371.4 Compare | HL_3DHS_005, HL_3IVK_006 | HL_1VWW_009 |
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tSH-R-R-R-R-R-R-R-R
- Heat map statistics
- Min 0.65 | Avg 0.33 | Max 0.65
Coloring options: