#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name for chain 1 2 3 4 51-52-4
1 HL_3AKZ_0103AKZ0.22884tRNA D-loopEtRNAGlnU13A14A15A21G22cWWcWS
2 HL_5B63_0035B630.00006tRNA D-loopD tRNAC913A914A915A922G923cWWncWS
3 HL_5AXM_0015AXM0.19585tRNA D-loopP tRNAC13A14G15A21G22cWWncWS
4 HL_3WQY_0013WQY0.47764tRNA D-loopC tRNAC1613A1614G1615A1621G1622cWW

3D structures

Complete motif including flanking bases
SequenceCounts
UAACGGUAG1
CAAUUGGAUAG1
CAGUUGGGAG1
CAGCGGGAG1
Non-Watson-Crick part of the motif
SequenceCounts
AACGGUA1
AAUUGGAUA1
AGUUGGGA1
AGCGGGA1

Release history

Release4.0
Date2025-08-13
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • tRNA D-loop (4)
  • Basepair signature
    cWW-cWS-F
    Heat map statistics
    Min 0.20 | Avg 0.28 | Max 0.58
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