Motif HL_65924.1 Version HL_65924.1 of this group appears in releases 0.1 to 1.18

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name for chain		1		2		3		4		5		6		7		8		9		10		11		12		13		14	1-14	2-13	3-10	4-8
1	HL_1FJG_008	1FJG	0.0000	0	A	SSU rRNA	C	320	A	321	C	322	U	323	G	324	A	325	G	326	A	327	C	328	A	329	C	330	G	331	G	332	G	333	cWW	cWW	tWH	tWH
2	HL_2AW7_008	2AW7	0.1498	0	A	16S ribosomal RNA	A	320	A	321	C	322	U	323	G	324	A	325	G	326	A	327	C	328	A	329	C	330	G	331	G	332	U	333	cWW	cWW	tWH	tWH

3D structures

Complete motif including flanking bases

Sequence	Counts
CACUGAGACACGGG	1
AACUGAGACACGGU	1

Non-Watson-Crick part of the motif

Sequence	Counts
ACUGAGACACGG	2

Release history

Release	0.1	0.2	0.3	0.4	0.5	0.6	0.7	0.8	1.0	1.1	1.2	1.3	1.4	1.5	1.6	1.7	1.8	1.9	1.10	1.11	1.12	1.13	1.14	1.15	1.16	1.17	1.18
Date	2011-12-08	2011-12-08	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-03-04	2013-04-06	2013-05-04	2013-06-01	2013-07-03	2013-08-03	2013-08-31	2013-09-28	2013-11-04	2013-12-07	2014-01-04	2014-02-01	2014-03-01	2014-03-29	2014-04-27	2014-06-15	2014-07-26	2014-09-06	2014-10-09
Status	New id, no parents	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (2)
Basepair signature: cWW-cWW-R-R-tWH-R-tWH-R-R-R
Heat map statistics: Min 0.15 | Avg 0.07 | Max 0.15

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Coloring options: Nucleotide numbers

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