Motif HL_66171.2 Version HL_66171.2 of this group appears in releases 3.48 to 3.53
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4WF9_038 | 4WF9 | 0.1104 | 3 | X | LSU rRNA | C | 1656 | G | 1657 | C | 1659 | C | 1661 | G | 1663 | cWW | |
| 2 | HL_7A0S_040 | 7A0S | 0.0953 | 3 | X | LSU rRNA | C | 1628 | G | 1629 | C | 1631 | C | 1633 | G | 1635 | cWW | |
| 3 | HL_4Y4O_142 | 4Y4O | 0.0000 | 3 | 2A | LSU rRNA | C | 1612 | G | 1613 | C | 1615 | C | 1617 | G | 1619 | cWW | |
| 4 | HL_4V9F_042 | 4V9F | 0.1293 | 3 | 0 | LSU rRNA | C | 1687 | G | 1688 | C | 1690 | C | 1692 | G | 1694 | cWW | |
| 5 | HL_5TBW_041 | 5TBW | 0.1926 | 3 | 1 | LSU rRNA | C | 1844 | G | 1845 | A | 1847 | C | 1849 | G | 1851 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGACACAG | 4 |
| CGCAGCAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GACACA | 4 |
| GCAGCA | 1 |
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