#SLoop idPDBDisc#Non-coreChain(s) 1 2 3 4 5 6 71-72-64-5
1 HL_8KAH_0038KAH0.94020IC86G87A88G89U90C91G92cWW
2 HL_7MDL_0017MDL0.67861EA14||AG15||AU16||AG19||AU20||AC20||A|AU21||AcWWncWWncSW
3 HL_4MGN_0024MGN0.32472BC13A14G15G18U19A20G21cWWncWScSH
4 HL_8UO6_0058UO60.26913BC13A14G15G19U20A21G22cWWncWScSH
5 HL_8UO6_0018UO60.27323AC13A14G15G19U20A21G22cWWncWScSH
6 HL_4YCO_0014YCO0.29713DC13A14G15G19U20A21G22cWWcWScSH
7 HL_6CU1_0036CU10.29542AC58A59A60G63U64A65G66cWWcWScSH
8 HL_8S95_0018S950.26933CC13A14G15G19U20A21G22cWWncWSncSH
9 HL_4WJ4_0014WJ40.00003BC13A14G15G19U20A21G22cWWncSW
10 HL_7E8O_0017E8O0.26152XC13A14G15G18U19A20G21cWWcSH
11 HL_7UZ0_0017UZ00.26432AC13A14G15G18U19A20G21cWWncSH
12 HL_1H4S_0011H4S0.29014TC13A14G15G19U20A21G22cWWcSH

3D structures

Complete motif including flanking bases
SequenceCounts
CAGUCGGUAG5
CAGUGGUAG3
CGAGUCG1
AGUGGUCU1
CAAUGGUAG1
CAGCCCGGUAG1
Non-Watson-Crick part of the motif
SequenceCounts
AGUCGGUA5
AGUGGUA3
GAGUC1
GUGGUC1
AAUGGUA1
AGCCCGGUA1

Release history

Release3.853.863.87
Date2024-06-192024-07-172024-08-14
StatusUpdated, 1 parentExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (12)
  • Basepair signature
    cWW-cWS-F-cSH
    Heat map statistics
    Min 0.09 | Avg 0.42 | Max 0.97
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