Motif HL_68499.1 Version HL_68499.1 of this group appears in releases 3.89 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1EC6_002 | 1EC6 | 0.0000 | 4 | D | 20-MER RNA HAIRPIN | G | 4 | A | 5 | C | 6 | C | 7 | U | 8 | A | 9 | G | 10 | C | 15 | C | 16 | C | 17 | cWW | ncWWa | |
| 2 | HL_5J7L_216 | 5J7L | 0.9978 | 2 | AA | SSU rRNA | U | 1009 | U | 1010 | C | 1011 | A | 1012 | G | 1013 | A | 1014 | G | 1015 | G | 1018 | A | 1019 | G | 1020 | ncWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GACCUAGAUCACCC | 1 |
| UUCAGAGAUGAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACCUAGAUCACC | 1 |
| UCAGAGAUGA | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Heat map statistics
- Min 1.00 | Avg 0.50 | Max 1.00
Coloring options: