Motif HL_69811.1 Version HL_69811.1 of this group appears in releases 3.2 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 3-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4W29_038 | 4W29 | 0.9107 | 2 | AX | tRNA | G | 52 | G | 53 | U | 54 | U | 55 | C | 56 | G | 57 | A | 58 | C | 61 | C | 62 | cWW | ncWW | |
| 2 | HL_1P6V_002 | 1P6V | 0.5648 | 2 | B | 45-MER | G | 44 | G | 45 | U | 46 | U | 47 | C | 48 | G | 49 | A | 50 | C | 53 | C | 54 | cWW | cWW | ntWW |
| 3 | HL_4V9I_040 | 4V9I | 0.0000 | 2 | AY | A-SITE tRNA | C | 52 | A | 53 | A | 54 | C | 55 | U | 56 | C | 57 | U | 58 | C | 61 | G | 62 | cWW | ncWW | |
| 4 | HL_4V7M_040 | 4V7M | 0.4740 | 2 | AY | tRNA | G | 51 | G | 52 | U | 53 | U | 54 | C | 55 | G | 56 | A | 57 | C | 60 | C | 61 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGUUCGAUCCC | 1 |
| GGUUCGAUUCC | 1 |
| CAACUCUACCG | 1 |
| GGUUCGAAUCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUUCGAUCC | 1 |
| GUUCGAUUC | 1 |
| AACUCUACC | 1 |
| GUUCGAAUC | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-R-R-R-R-R-R
- Heat map statistics
- Min 0.47 | Avg 0.55 | Max 0.94
Coloring options: