3D structure

PDB id
4V7M (explore in PDB, NAKB, or RNA 3D Hub)
Description
The structures of Capreomycin bound to the 70S ribosome.
Experimental method
X-RAY DIFFRACTION
Resolution
3.45 Å

Loop

Sequence
GGUUCGAAUCC
Length
11 nucleotides
Bulged bases (A, C, G, U)
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_22031.2
Basepair signature
cWW-cWW-F-F-F-F
Number of instances in this motif group
7

Unit IDs

4V7M|1|AY|G|51
4V7M|1|AY|G|52
4V7M|1|AY|U|53
4V7M|1|AY|U|54
4V7M|1|AY|C|55
4V7M|1|AY|G|56
4V7M|1|AY|A|57
4V7M|1|AY|A|58
4V7M|1|AY|U|59
4V7M|1|AY|C|60
4V7M|1|AY|C|61

Current chains

Chain AY
tRNA-Gln

Nearby chains

Chain BA
Large subunit ribosomal RNA; LSU rRNA
Chain BC
50S ribosomal protein L1

Coloring options:

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