Motif HL_70383.1 Version HL_70383.1 of this group appears in releases 1.16 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3J7A_035 | 3J7A | 0.0000 | 3 | 7 | tRNA | C | 11 | G | 12 | C | 13 | A | 14 | G | 15 | G | 19 | U | 20 | U | 21 | A | 22 | G | 23 | cWW | ncWW | |
| 2 | HL_4A1B_016 | 4A1B | 0.9803 | 0 | 1 | 26S RRNA | G | 710 | U | 711 | G | 712 | G | 713 | A | 714 | A | 715 | A | 716 | A | 717 | A | 718 | C | 719 | cWW | ncWW | tSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGCAGUUGGUUAG | 1 |
| GUGGAAAAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GCAGUUGGUUA | 1 |
| UGGAAAAA | 1 |
Release history
Parent motifs
| Parent motif | Common motif instances | Only in HL_70383.1 | Only in the parent motif |
|---|---|---|---|
| HL_69403.1 Compare | HL_4A1B_016 | HL_3J7A_035 |
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-R-R-R-R-R
- Heat map statistics
- Min 0.98 | Avg 0.49 | Max 0.98
Coloring options: