HL_4A1B_016

3D structure

PDB id

4A1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophila 60S ribosomal subunit in complex with initiation factor 6. This file contains 26S rRNA and proteins of molecule 3.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

GUGGAAAAAC

Length

10 nucleotides

Bulged bases

4A1B|1|1|A|716

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70383.1

Basepair signature

cWW-cWW-R-R-R-R-R

Number of instances in this motif group

2

Unit IDs

4A1B|1|1|G|710
4A1B|1|1|U|711
4A1B|1|1|G|712
4A1B|1|1|G|713
4A1B|1|1|A|714
4A1B|1|1|A|715
4A1B|1|1|A|716
4A1B|1|1|A|717
4A1B|1|1|A|718
4A1B|1|1|C|719

Current chains

Chain 1

26S RRNA

Nearby chains

Chain U

RPL13