Motif HL_70740.1 Version HL_70740.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5BTP_002 | 5BTP | 0.0000 | 0 | A | ZMP/ZTP riboswitch | C | 62 | G | 63 | A | 64 | C | 65 | C | 66 | G | 67 | U | 68 | C | 69 | U | 70 | G | 71 | G | 72 | cWW |
| 2 | HL_4R0D_002 | 4R0D | 0.9466 | 0 | A | Group II catalytic intron | G | 48 | A | 49 | A | 50 | U | 51 | C | 52 | G | 53 | U | 54 | U | 55 | C | 56 | A | 57 | U | 58 | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGACCGUCUGG | 1 |
| GAAUCGUUCAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GACCGUCUG | 1 |
| AAUCGUUCA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R-R-R-R-R-R
- Heat map statistics
- Min 0.95 | Avg 0.47 | Max 0.95
Coloring options: