HL_4R0D_002
3D structure
- PDB id
- 4R0D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a eukaryotic group II intron lariat
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.68 Å
Loop
- Sequence
- GAAUCGUUCAU
- Length
- 11 nucleotides
- Bulged bases
- 4R0D|1|A|A|49, 4R0D|1|A|A|50
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_65532.1
- Basepair signature
- cWW-R-R-R-R-R-R-cSH
- Number of instances in this motif group
- 2
Unit IDs
4R0D|1|A|G|48
4R0D|1|A|A|49
4R0D|1|A|A|50
4R0D|1|A|U|51
4R0D|1|A|C|52
4R0D|1|A|G|53
4R0D|1|A|U|54
4R0D|1|A|U|55
4R0D|1|A|C|56
4R0D|1|A|A|57
4R0D|1|A|U|58
Current chains
- Chain A
- GROUP IIB INTRON LARIAT
Nearby chains
No other chains within 10ÅColoring options: