Motif HL_74373.1 Version HL_74373.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2QUW_003 | 2QUW | 0.6844 | 0 | B | C | 42 | G | 43 | U | 44 | G | 45 | A | 46 | G | 47 | cWW |
| 2 | HL_2ZZN_004 | 2ZZN | 0.5778 | 3 | D | U | 13 | A | 14 | G | 15 | C | 20 | U | 21 | A | 22 | cWW |
| 3 | HL_2QUS_006 | 2QUS | 0.0000 | 0 | B | C | 42 | G | 43 | U | 44 | G | 45 | A | 46 | G | 47 | cWW |
| 4 | HL_4V88_216 | 4V88 | 0.7569 | 0 | A6 | C | 1359 | A | 1360 | U | 1361 | U | 1362 | U | 1363 | G | 1364 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGUGAG | 2 |
| UAGGGGCUA | 1 |
| CAUUUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUGA | 2 |
| AGGGGCU | 1 |
| AUUU | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-R-R-R
- Heat map statistics
- Min 0.58 | Avg 0.54 | Max 0.83
Coloring options: