Motif HL_75196.1 Version HL_75196.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 2-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2AW7_021 | 2AW7 | 0.2843 | 1 | A | 16S ribosomal RNA | G | 963 | A | 964 | U | 965 | G | 966 | C | 967 | A | 968 | A | 969 | C | 970 | C | 972 | cWW | ncsS |
| 2 | HL_1FJG_021 | 1FJG | 0.0000 | 1 | A | SSU rRNA | G | 963 | A | 964 | A | 965 | G | 966 | C | 967 | A | 968 | A | 969 | C | 970 | C | 972 | cWW | |
| 3 | HL_3O30_026 | 3O30 | 0.1732 | 1 | 1 | 18S ribosomal RNA | G | 1188 | A | 1189 | C | 1190 | U | 1191 | C | 1192 | A | 1193 | A | 1194 | C | 1195 | C | 1197 | cWW | csS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUGCAACGC | 1 |
| GAAGCAACGC | 1 |
| GACUCAACAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUGCAACG | 1 |
| AAGCAACG | 1 |
| ACUCAACA | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_75196.1 | Only in the child motif |
|---|---|---|---|
| HL_64543.1 Compare | HL_1FJG_021, HL_2AW7_021 | HL_3O30_026 | HL_2XZM_025, HL_3U5F_027 |
Coloring options: