Motif HL_75579.3 Version HL_75579.3 of this group appears in releases 1.14 to 1.14
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1S72_011 | 1S72 | 0.2048 | 2 | 0 | G | 326 | A | 327 | C | 330 | cWW |
| 2 | HL_2QBG_012 | 2QBG | 0.1852 | 2 | B | G | 319 | A | 320 | C | 323 | cWW |
| 3 | HL_4IOA_010 | 4IOA | 0.1564 | 2 | X | C | 330 | U | 331 | G | 334 | cWW |
| 4 | HL_4NVV_010 | 4NVV | 0.0000 | 2 | A | C | 343 | A | 344 | G | 347 | cWW |
| 5 | HL_4A1B_006 | 4A1B | 0.1613 | 2 | 1 | C | 208 | A | 209 | G | 212 | cWW |
| 6 | HL_3U5H_006 | 3U5H | 0.2023 | 2 | 5 | C | 208 | A | 209 | G | 212 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUAC | 2 |
| CUCAG | 1 |
| CAGAG | 1 |
| CAAAG | 1 |
| CAUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUA | 3 |
| UCA | 1 |
| AGA | 1 |
| AAA | 1 |
Release history
| Release | 1.14 |
|---|---|
| Date | 2014-04-27 |
| Status | Updated, 2 parents |
Parent motifs
| Parent motif | Common motif instances | Only in HL_75579.3 | Only in the parent motif |
|---|---|---|---|
| HL_75579.2 Compare | HL_1S72_011, HL_4IOA_010, HL_3U5H_006, HL_4A1B_006 | HL_4NVV_010, HL_2QBG_012 | HL_3V2F_011, HL_2Y9H_001 |
| HL_59604.1 Compare | HL_2QBG_012 | HL_1S72_011, HL_3U5H_006, HL_4IOA_010, HL_4NVV_010, HL_4A1B_006 |
Children motifs
| Child motif | Common motif instances | Only in HL_75579.3 | Only in the child motif |
|---|---|---|---|
| HL_75579.4 Compare | HL_4A1B_006, HL_4NVV_010, HL_2QBG_012, HL_1S72_011, HL_3U5H_006, HL_4IOA_010 | HL_4P9R_005, HL_4CUV_006 |
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