Motif HL_75579.2 Version HL_75579.2 of this group appears in releases 1.1 to 1.13
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1S72_011 | 1S72 | 0.2883 | 2 | 0 | G | 326 | A | 327 | C | 330 | cWW |
| 2 | HL_4IOA_010 | 4IOA | 0.2491 | 2 | X | C | 330 | U | 331 | G | 334 | cWW |
| 3 | HL_3V2F_011 | 3V2F | 0.1448 | 2 | A | C | 319 | A | 320 | G | 323 | cWW |
| 4 | HL_4A1B_006 | 4A1B | 0.0000 | 2 | 1 | C | 208 | A | 209 | G | 212 | cWW |
| 5 | HL_3U5H_006 | 3U5H | 0.0964 | 2 | 5 | C | 208 | A | 209 | G | 212 | cWW |
| 6 | HL_2Y9H_001 | 2Y9H | 0.2491 | 3 | B | C | 11 | G | 12 | G | 16 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUAC | 1 |
| CUCAG | 1 |
| CAGAG | 1 |
| CAAAG | 1 |
| CAUAG | 1 |
| CGCGUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUA | 2 |
| UCA | 1 |
| AGA | 1 |
| AAA | 1 |
| GCGU | 1 |
Release history
| Release | 1.1 | 1.2 | 1.3 | 1.4 | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2013-04-06 | 2013-05-04 | 2013-06-01 | 2013-07-03 | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-04 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_75579.2 | Only in the parent motif |
|---|---|---|---|
| HL_75579.1 Compare | HL_3V2F_011, HL_2Y9H_001, HL_3U5H_006, HL_1S72_011, HL_4A1B_006 | HL_4IOA_010 | HL_2ZJR_010 |
Children motifs
| Child motif | Common motif instances | Only in HL_75579.2 | Only in the child motif |
|---|---|---|---|
| HL_75579.3 Compare | HL_1S72_011, HL_4IOA_010, HL_3U5H_006, HL_4A1B_006 | HL_3V2F_011, HL_2Y9H_001 | HL_4NVV_010, HL_2QBG_012 |
| HL_63997.1 Compare | HL_2Y9H_001 | HL_3V2F_011, HL_1S72_011, HL_4IOA_010, HL_3U5H_006, HL_4A1B_006 |
Coloring options: